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A Community Convention for Ecological Forecasting: Output Files and Metadata Version 1.0This paper summarizes the open community conventions developed by the Ecological Forecasting Initiative (EFI) for the common formatting and archiving of ecological forecasts and the metadata associated with these forecasts. Such open standards are intended to promote interoperability and facilitate forecast communication, distribution, validation, and synthesis. For output files, we first describe the convention conceptually in terms of global attributes, forecast dimensions, forecasted variables, and ancillary indicator variables. We then illustrate the application of this convention to the two file formats that are currently preferred by the EFI, netCDF (network common data form), and comma-separated values (CSV), but note that the convention is extensible to future formats. For metadata, EFI's convention identifies a subset of conventional metadata variables that are required (e.g., temporal resolution and output variables) but focuses on developing a framework for storing information about forecast uncertainty propagation, data assimilation, and model complexity, which aims to facilitate cross-forecast synthesis. The initial application of this convention expands upon the Ecological Metadata Language (EML), a commonly used metadata standard in ecology. To facilitate community adoption, we also provide a Github repository containing a metadata validator tool and several vignettes in R and Python on how to both write and read in the EFI standard. Lastly, we provide guidance on forecast archiving, making an important distinction between short-term dissemination and long-term forecast archiving, while also touching on the archiving of code and workflows. Overall, the EFI convention is a living document that can continue to evolve over time through an open community process.
Document ID
20230017282
Acquisition Source
Goddard Space Flight Center
Document Type
Accepted Manuscript (Version with final changes)
Authors
Michael C. Dietze ORCID
(Boston University Boston, Massachusetts, United States)
R. Quinn Thomas ORCID
(Virginia Tech Blacksburg, United States)
Jody Peters
(University of Notre Dame Notre Dame, Indiana, United States)
Carl Boettiger
(University of California, Berkeley Berkeley, United States)
Gerbrand Koren ORCID
(Utrecht University Utrecht, Netherlands)
Alexey N. Shiklomanov
(Goddard Space Flight Center Greenbelt, Maryland, United States)
Jaime Ashander ORCID
(United States Geological Survey Reston, United States)
Date Acquired
November 28, 2023
Publication Date
November 23, 2023
Publication Information
Publication: Ecosphere
Publisher: Ecological Society of America
Volume: 14
Issue: 11
Issue Publication Date: November 1, 2023
e-ISSN: 2150-8925
Subject Category
Documentation and Information Science
Meteorology and Climatology
Funding Number(s)
WBS: 547714.04.13.02.23
Distribution Limits
Public
Copyright
Use by or on behalf of the US Gov. Permitted.
Technical Review
External Peer Committee
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