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Unveiling the Transferability of PLSR Models for Leaf Trait Estimation: Lessons from a Comprehensive Analysis with a Novel Global DatasetLeaf traits are essential for understanding many physiological and ecological processes. Partial least-squares regression (PLSR) models with leaf spectroscopy are widely applied for trait estimation, but their transferability across space, time and plant functional types (PFTs) remains unclear.

We compiled a novel dataset of paired leaf traits and spectra, with 47,393 records for >700 species and eight PFTs at 101 globally-distributed locations across multiple seasons. Using this dataset, we conducted an unprecedented comprehensive analysis to assess the transferability of PLSR models in estimating leaf traits.

While PLSR models demonstrate commendable performance in predicting chlorophyll content, carotenoid, leaf water and leaf mass per area prediction within their training data space, their efficacy diminishes when extrapolating to new contexts. Specifically, extrapolating to locations, seasons, and PFTs beyond the training data leads to reduced R2 (0.12-0.49, 0.15-0.42, and 0.25-0.56) and increased NRMSE (3.58-18.24%, 6.27-11.55% and 7.0-33.12%) compared to nonspatial random cross-validation (NRCV). The results underscore the importance of incorporating greater spectral diversity in model training to boost its transferability.

These findings highlight potential errors in estimating leaf traits across large spatial domains, diverse PFTs and time due to biased validation schemes and provide guidance for future field sampling strategies and remote sensing applications.
Document ID
20240006155
Acquisition Source
Goddard Space Flight Center
Document Type
Accepted Manuscript (Version with final changes)
Authors
Fujiang Ji ORCID
(University of Wisconsin–Madison Madison, United States)
Fa Li ORCID
(University of Wisconsin–Madison Madison, United States)
Dalei Hao ORCID
(Pacific Northwest National Laboratory Richland, United States)
Alexey N. Shiklomanov ORCID
(Goddard Space Flight Center Greenbelt, United States)
Xi Yang ORCID
(University of Virginia Charlottesville, United States)
Philip A. Townsend ORCID
(University of Wisconsin–Madison Madison, United States)
Hamid Dashti ORCID
(University of Wisconsin–Madison Madison, United States)
Tatsuro Nakaji ORCID
(Hokkaido University Sapporo, Hokkaidô, Japan)
Kyle R. Kovach ORCID
(University of Wisconsin–Madison Madison, United States)
Haoran Liu
(University of Wisconsin–Madison Madison, United States)
Meng Luo
(University of Wisconsin–Madison Madison, United States)
Min Chen
(University of Wisconsin–Madison Madison, United States)
Date Acquired
May 14, 2024
Publication Date
May 6, 2024
Publication Information
Publication: New Phytologist
Publisher: Wiley
Volume: 243
Issue: 1
Issue Publication Date: July 1, 2024
ISSN: 0028-646X
e-ISSN: 1469-8137
Subject Category
Astronomy
Instrumentation and Photography
Funding Number(s)
WBS: 281945.02.61.05.30
CONTRACT_GRANT: 80NSSC21K0568
CONTRACT_GRANT: 80NSSC21K1702
CONTRACT_GRANT: 1027576
CONTRACT_GRANT: NNH20ZDA001N-NIP
OTHER: 20-NIP20-0134
CONTRACT_GRANT: DEB-1638720
CONTRACT_GRANT: DBI-2021898
Distribution Limits
Public
Copyright
Portions of document may include copyright protected material.
Technical Review
External Peer Committee
Keywords
Leaf traits
Leaf spectroscopy
Partial least-squares regression (PLSR)
Transferability
Cross-validation
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